专题:Protein Structure and Dynamics

This cluster of papers focuses on the prediction and analysis of protein structures using methods such as molecular dynamics simulations, force fields, homology modeling, and circular dichroism. It also explores topics related to intrinsically disordered proteins, enzyme catalysis, and the effects of macromolecular crowding on protein behavior.
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Accurate structure prediction of biomolecular interactions with AlphaFold 3

article Full Text OpenAlex 15628 FWCI1789.1161

ColabFold: making protein folding accessible to all

article Full Text OpenAlex 9362 FWCI544.4498

Evolutionary-scale prediction of atomic-level protein structure with a language model

article Full Text OpenAlex 5527 FWCI408.417

UCSF ChimeraX : Tools for structure building and analysis

article Full Text OpenAlex 4494 FWCI394.4581

SignalP 6.0 predicts all five types of signal peptides using protein language models

article Full Text OpenAlex 2887 FWCI152.8802

Fast and accurate protein structure search with Foldseek

article Full Text OpenAlex 2582 FWCI187.9575

InterPro in 2022

article Full Text OpenAlex 2428 FWCI151.7229

De novo design of protein structure and function with RFdiffusion

article Full Text OpenAlex 2336 FWCI172.8319

AmberTools

article Full Text OpenAlex 2127 FWCI299.4819

Accurate proteome-wide missense variant effect prediction with AlphaMissense

article Full Text OpenAlex 2123 FWCI310.1471