专题:Chromosomal and Genetic Variations

This cluster of papers explores the evolution of plant genomes, with a focus on polyploidy, transposable elements, small RNAs, and the role of repetitive elements. It investigates the impact of genome duplication on genetic diversity, speciation, and epigenetic regulation, shedding light on the evolutionary significance of these processes in plants.
最新文献
Oatk: a de novo assembly tool for complex plant organelle genomes

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Complex genetic variation in nearly complete human genomes

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A telomere-to-telomere reference genome assembly of the red silk cotton tree (Bombax ceiba)

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Nucleosome spacing can fine-tune higher-order chromatin assembly

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HiFi based metagenomic assembly strategy provides accuracy near isolated genome resolution in MAG assembly

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Unraveling evolutionary pathways: allopolyploidization and introgression in polyploid Prunus (Rosaceae)

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Repeated duplications and losses shaped SMC complex evolution from archaeal ancestors to modern eukaryotes

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Bimodal centromeres in pentaploid dogroses shed light on their unique meiosis

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Cross-species modeling of plant genomes at single-nucleotide resolution using a pretrained DNA language model

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SVbyEye: A visual tool to characterize structural variation among whole-genome assemblies

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近5年高被引文献
BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes

article Full Text OpenAlex 4133 FWCI248.444

Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm

article Full Text OpenAlex 3851 FWCI224.004

The complete sequence of a human genome

article Full Text OpenAlex 2381 FWCI325.284

Towards complete and error-free genome assemblies of all vertebrate species

article Full Text OpenAlex 2240 FWCI138.699

YaHS: yet another Hi-C scaffolding tool

article Full Text OpenAlex 1494 FWCI140.872

BUSCO: Assessing Genomic Data Quality and Beyond

article Full Text OpenAlex 837 FWCI49.424

CRISPR technology: A decade of genome editing is only the beginning

review Full Text OpenAlex 712 FWCI38.665

Gfastats: conversion, evaluation and manipulation of genome sequences using assembly graphs

article Full Text OpenAlex 599 FWCI54.622

Muscle5: High-accuracy alignment ensembles enable unbiased assessments of sequence homology and phylogeny

article Full Text OpenAlex 572 FWCI53.07

Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing

article Full Text OpenAlex 551 FWCI52.196