专题:Gene Regulatory Network Analysis

This cluster of papers focuses on the stochastic behavior and regulation of gene networks, exploring topics such as stochastic gene expression, synthetic biology, cellular noise, network inference, genetic circuits, biochemical modeling, cell signaling dynamics, and single-cell analysis. The research delves into understanding the inherent stochasticity in gene regulatory networks and its implications for cellular functions.
最新文献
The Separatrix Invariance and Z2 Parity Algebra

article Full Text OpenAlex

Resource-rational reinforcement learning and sensorimotor causal states, and resource-rational maximiners

article Full Text OpenAlex

Reachability in Vector Addition System with States Parameterized by Geometric Dimension

article Full Text OpenAlex

Consistency–Defect Gradient Flows and No–Meta Self–Purification in Value–Anchored Multi–Agent Systems

preprint Full Text OpenAlex

Data-based optimal control of logical networks

article Full Text OpenAlex

Inferring the regulation dynamics of oscillatory networks from scRNA-seq data

article Full Text OpenAlex

Physics-informed AI with chemical master equation dynamics for driver-gene subclone detection and risk labeling

article Full Text OpenAlex

GraphComm predicts cell cell communication using a graph based deep learning method in single cell RNA sequencing data

article Full Text OpenAlex

Improved gene regulatory network inference from single cell data with dropout augmentation

article Full Text OpenAlex

Mathematical Framework for Hierarchical Cell Identity Control by Collective Enhancer Dynamics

article Full Text OpenAlex

近5年高被引文献
Methods and applications for single-cell and spatial multi-omics

review Full Text OpenAlex 968 FWCI178.80060255

CellRank for directed single-cell fate mapping

article Full Text OpenAlex 699 FWCI83.56395827

A Python library for probabilistic analysis of single-cell omics data

letter Full Text OpenAlex 698 FWCI85.28692648

Unsupervised removal of systematic background noise from droplet-based single-cell experiments using CellBender

article Full Text OpenAlex 646 FWCI121.614117

Comparison and evaluation of statistical error models for scRNA-seq

article Full Text OpenAlex 570 FWCI68.67259015

Dissecting cell identity via network inference and in silico gene perturbation

article Full Text OpenAlex 524 FWCI91.72118137

Multi-omics single-cell data integration and regulatory inference with graph-linked embedding

article Full Text OpenAlex 501 FWCI61.28844067

Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data

article Full Text OpenAlex 492 FWCI62.02685562

The dawn of spatial omics

review Full Text OpenAlex 449 FWCI83.18034262

Quantifying the local adaptive landscape of a nascent bacterial community

article Full Text OpenAlex 404 FWCI144.06825493