专题：Scientific Computing and Data Management

This cluster of papers focuses on the management, reproducibility, and provenance of scientific workflows, particularly in the fields of bioinformatics and computational research. It explores topics such as data provenance, workflow management systems, semantic web services, cyberinfrastructure, and software development for scientific applications.
最新文献
The PRIDE database at 20 years: 2025 update

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Global research trends in research data management: A bibliometrics approach

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Boosting Federated Domain Generalization: Understanding the Role of Advanced Pre-Trained Architectures

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Knowledge co-creation during urban simulation computation to enable broader participation

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Understanding Data Science Instruction in Multiple STEM Disciplines

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Enhancing the FAIRness of Arctic Research Data Through Semantic Annotation

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A data analytics case study analyzing IRS SOI migration data using no code, low code technologies

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RRGcode: Deep hierarchical search-based code generation

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Equivariant, safe and sensitive — graph networks for new physics

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Analysis on open data as a foundation for data-driven research

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近5年高被引文献
Twelve years of SAMtools and BCFtools

article Full Text OpenAlex 13054 FWCI924.11974819

Search and sequence analysis tools services from EMBL-EBI in 2022

article Full Text OpenAlex 2392 FWCI304.47309685

PRISMA2020 : An R package and Shiny app for producing PRISMA 2020‐compliant flow diagrams, with interactivity for optimised digital transparency and Open Synthesis

article Full Text OpenAlex 2322 FWCI503.52161276

Sustainable data analysis with Snakemake

preprint Full Text OpenAlex 1550 FWCI498.97228315

AmberTools

article Full Text OpenAlex 1298 FWCI241.00018911

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update

article Full Text OpenAlex 1277 FWCI477.76477423

Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR

article Full Text OpenAlex 984 FWCI124.54598788

The Reactome Pathway Knowledgebase 2024

article Full Text OpenAlex 904 FWCI170.81677502

Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users

article Full Text OpenAlex 880 FWCI71.19867189

The PRIDE database at 20 years: 2025 update

article Full Text OpenAlex 851 FWCI1298.50272401